| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Pingxi Xu, Walter S Lea. Probing insect odorant receptors with their cognate ligands: insights into structural features. Biochemical and biophysical research communications. vol 435. issue 3. 2013-08-23. PMID:23673297. |
additionally, the "corner residues" of prolines, including gly, tyr, and leu are functionally important thus suggesting that turns are stabilized not only by backbone hydrogen bonds, but also by side-chain interactions. |
2013-08-23 |
2023-08-12 |
xenopus_laevis |
| Saleh H Salmen, Hamza M Abu-Tarboush, Abdulrahman A Al-Saleh, Ali A Metwall. Amino acids content and electrophoretic profile of camel milk casein from different camel breeds in Saudi Arabia. Saudi journal of biological sciences. vol 19. issue 2. 2013-08-20. PMID:23961177. |
the non-essential amino acids (gly, tyr, ala and asp) and the essential amino acids (thr, val and ile) were significantly higher in cow milk κ-casein compared to that for all camel milk breeds. |
2013-08-20 |
2023-08-12 |
Not clear |
| Quan Luo, Chunqiu Zhang, Lu Miao, Dongmei Zhang, Yushi Bai, Chunxi Hou, Junqiu Liu, Fei Yan, Ying Mu, Guimin Lu. Triple mutated antibody scFv2F3 with high GPx activity: insights from MD, docking, MDFE, and MM-PBSA simulation. Amino acids. vol 44. issue 3. 2013-08-14. PMID:23224825. |
the docking studies illustrated the importance of this loop that favors the conformational shift of tyr(54), asn(55), and gly(56) to stabilize substrate binding. |
2013-08-14 |
2023-08-12 |
Not clear |
| C Flummer, H Lyby, K S Storli, V Bjerre-Harpøth, B M Nielsen, M Krämer, B A Røjen, N B Kristensen, P K Thei. Effects of β-hydroxy β-methyl butyrate supplementation to sows in late gestation on absorption and hepatic metabolism of glucose and amino acids during transition. Journal of animal science. vol 90 Suppl 4. 2013-07-29. PMID:23365311. |
a multicatheter sow model was established to study the effects of dietary β-hydroxy β-methyl butyrate (hmb) supplementation on net portal flux (npf) and net hepatic flux (nhf) of hmb, glucose, and the aa ala, gly, ile, leu, phe, tyr, and val. |
2013-07-29 |
2023-08-12 |
Not clear |
| C Flummer, H Lyby, K S Storli, V Bjerre-Harpøth, B M Nielsen, M Krämer, B A Røjen, N B Kristensen, P K Thei. Effects of β-hydroxy β-methyl butyrate supplementation to sows in late gestation on absorption and hepatic metabolism of glucose and amino acids during transition. Journal of animal science. vol 90 Suppl 4. 2013-07-29. PMID:23365311. |
net portal flux of glucose and all measured aa, except for gly and tyr, were affected the trt × time interaction (p < 0.01). |
2013-07-29 |
2023-08-12 |
Not clear |
| P Guggenbuhl, Y Waché, C Simoes Nunes, F Fr. Effects of a 6-phytase on the apparent ileal digestibility of minerals and amino acids in ileorectal anastomosed pigs fed on a corn-soybean meal-barley diet. Journal of animal science. vol 90 Suppl 4. 2013-07-29. PMID:23365323. |
pigs fed diet rh1000 increased (p < 0.05) digestibility of cp, total aa, indispensable aa, glu + gln, his, gly, ala, tyr, leu, phe, and met. |
2013-07-29 |
2023-08-12 |
Not clear |
| Kristin R Baker, Kathleen Postl. Mutations in Escherichia coli ExbB transmembrane domains identify scaffolding and signal transduction functions and exclude participation in a proton pathway. Journal of bacteriology. vol 195. issue 12. 2013-07-25. PMID:23603742. |
all tmd residues with potentially function-specific side chains (lys, cys, ser, thr, tyr, glu, and asn) and residues with probable structure-specific side chains (trp, gly, and pro) were substituted with ala and evaluated in multiple assays. |
2013-07-25 |
2023-08-12 |
Not clear |
| Mona Connolly, Yolanda Pérez, Enrique Mann, Bernardo Herradón, María L Fernández-Cruz, José M Nava. Peptide-biphenyl hybrid-capped AuNPs: stability and biocompatibility under cell culture conditions. Nanoscale research letters. vol 8. issue 1. 2013-07-22. PMID:23829784. |
in this study, we explored the biocompatibility of au nanoparticles (nps) capped with peptide-biphenyl hybrid (pbh) ligands containing glycine (gly), cysteine (cys), tyrosine (tyr), tryptophan (trp) and methionine (met) amino acids in the human hepatocellular carcinoma cell line hep g2. |
2013-07-22 |
2023-08-12 |
human |
| J A Conde-Aguilera, C Cobo-Ortega, S Tesseraud, M Lessire, Y Mercier, J van Milge. Changes in body composition in broilers by a sulfur amino acid deficiency during growth. Poultry science. vol 92. issue 5. 2013-06-28. PMID:23571336. |
in contrast, it resulted in a decrease in the concentrations of lys and glu in the empty body, of phe, tyr, gly, and glu in the pectoralis muscle, and of ala in the offal (p < 0.05). |
2013-06-28 |
2023-08-12 |
Not clear |
| Xiao-Ying Pu, Qijing Zhang, Jing-Cao Pan, Zhangqi Shen, Wei Zhan. Spontaneous mutation frequency and molecular mechanisms of Shigella flexneri fluoroquinolone resistance under antibiotic selective stress. World journal of microbiology & biotechnology. vol 29. issue 2. 2013-06-10. PMID:23070800. |
pcr sequencing of the ten randomly selected resistant colonies (minimum inhibitory concentrations (mics) of 0.125 μg ml(-1), n = 5 and 0.25 μg ml(-1), n = 5) revealed that all colonies had mutations in the gyra gene at either codon 83 (ser83 → leu) or 87 (asp87 → tyr or → gly), both of which were confirmed at mic of 0.125 μg ml(-1). |
2013-06-10 |
2023-08-12 |
Not clear |
| Michael L Berger, Thomas Pöhler, Oliver Schadt, Maximilian Stanger, Patrick Rebernik, Petra Scholze, Christian R No. Exploring the polyamine regulatory site of the NMDA receptor: a parallel synthesis approach. ChemMedChem. vol 8. issue 1. 2013-05-28. PMID:23225329. |
solid-phase parallel synthesis based on cross-linked polystyrene and a wang anchor allowed the low-scale preparation of four small libraries based on the combination of two amino acid residues (out of gly, leu, phe, lys, phenylglycine, tyr, trp, his, and arg). |
2013-05-28 |
2023-08-12 |
rat |
| Huansheng Yang, Dezhi Fu, Hua Shao, Xiangfeng Kong, Wence Wang, Xiaojian Yang, Charles M Nyachoti, Yulong Yi. Impacts of birth weight on plasma, liver and skeletal muscle neutral amino acid profiles and intestinal amino acid transporters in suckling Huanjiang mini-piglets. PloS one. vol 7. issue 12. 2013-05-24. PMID:23236407. |
results showed that the suckling piglets with lbw had higher contents of thr, ser, gly, ala, val, met, ile, leu, tyr, phe and pro in liver, and gly in skeletal muscle, whereas lower contents of met, ser and ala in plasma when compared with the hbw littermates. |
2013-05-24 |
2023-08-12 |
Not clear |
| Matthew W Breed, Andrea P O Jordan, Pyone P Aye, Cornelis F Lichtveld, Cecily C Midkiff, Faith R Schiro, Beth S Haggarty, Chie Sugimoto, Xavier Alvarez, Netanya G Sandler, Daniel C Douek, Marcelo J Kuroda, Bapi Pahar, Michael Piatak, Jeffrey D Lifson, Brandon F Keele, James A Hoxie, Andrew A Lackne. Loss of a tyrosine-dependent trafficking motif in the simian immunodeficiency virus envelope cytoplasmic tail spares mucosal CD4 cells but does not prevent disease progression. Journal of virology. vol 87. issue 3. 2013-03-05. PMID:23152518. |
here, we evaluate in rhesus macaques a novel attenuated variant of pathogenic sivmac239, termed Δgy, which contains a deletion of a tyr and a proximal gly from a highly conserved yxxØ trafficking motif in the envelope cytoplasmic tail. |
2013-03-05 |
2023-08-12 |
human |
| Fernando Diez-García, Avijit Chakrabartty, Carlos González, Douglas V Laurent. An Arg-rich putative prebiotic protein is as stable as its Lys-rich variant. Archives of biochemistry and biophysics. vol 528. issue 2. 2013-02-11. PMID:23022061. |
since gly, ala and ile, and in lesser amounts arg and tyr have been reported to form under putative prebiotic earth conditions, it is plausible that ria7-like peptides might have formed on the primitive earth and interacted with rnas. |
2013-02-11 |
2023-08-12 |
Not clear |
| Amandeep Kaur Kahlon, Mahendra P Darokar, Ashok Sharm. Probing the evolutionary conserved regions within functional site of drug-resistant target proteins of Staphylococcus aureus: In silico phylogenetic motif profiling approach. Indian journal of biochemistry & biophysics. vol 49. issue 6. 2013-02-07. PMID:23350279. |
it was found that in beta-lactamase, tyr, gly, thr, asn and in metallo-beta-lactamase, thr, his, gly, leu, arg and asp residues were highly conserved. |
2013-02-07 |
2023-08-12 |
Not clear |
| Mei-Xiu Zhang, Xi-Chang Wang, Yuan Liu, Xing-Lian Xu, Guang-Hong Zho. Isolation and identification of flavour peptides from Puffer fish (Takifugu obscurus) muscle using an electronic tongue and MALDI-TOF/TOF MS/MS. Food chemistry. vol 135. issue 3. 2013-02-06. PMID:22953881. |
hydrophilic amino acids residues tyr, gly, gly, thr, and phe are likely to contribute to the umami and sweet taste of this octapeptide. |
2013-02-06 |
2023-08-12 |
Not clear |
| Pradeep Hanumanthappa, Mahesh K Teli, Rajanikant G Krishnamurth. Generation of pharmacophore and atom based 3D-QSAR model of novel isoquinolin-1-one and quinazolin-4-one-type inhibitors of TNFα. Medicinal chemistry (Shariqah (United Arab Emirates)). vol 8. issue 3. 2012-12-10. PMID:22530913. |
docking study revealed the important amino acid residues (his 15, tyr 59, tyr 151, gly 121 and gly 122) in the active site of tnfα that are involved in binding of the active ligand. |
2012-12-10 |
2023-08-12 |
Not clear |
| M Benuck, M J Berg, N Mark. Separate metabolic pathways for Leu-enkephalin and Met-enkephalin-Arg(6)-Phe(7) degradation by rat striatal synaptosomal membranes. Neurochemistry international. vol 4. issue 5. 2012-10-02. PMID:20487892. |
bestatin, an aminopeptidase inhibitor, prevented the release of tyr and the tetrapeptide, but not secondary cleavage at the gly phe site leading to the release of tyr-gly-gly and phe-leu. |
2012-10-02 |
2023-08-12 |
rat |
| Mehdi Shakourian-Fard, Alireza Fattahi, Ahmad Baya. Ionic liquid based on α-amino acid anion and N7,N9-dimethylguaninium cation ([dMG][AA]): theoretical study on the structure and electronic properties. The journal of physical chemistry. A. vol 116. issue 22. 2012-09-28. PMID:22545810. |
the interactions between five amino acid based anions ([aa](-) (aa = gly, phe, his, try, and tyr)) and n7,n9-dimethylguaninium cation ([dmg](+)) have been investigated by the hybrid density functional theory method b3lyp together with the basis set 6-311++g(d,p). |
2012-09-28 |
2023-08-12 |
Not clear |
| Didier Jollivet, Jean Mary, Nicolas Gagnière, Arnaud Tanguy, Eric Fontanillas, Isabelle Boutet, Stéphane Hourdez, Béatrice Segurens, Jean Weissenbach, Olivier Poch, Odile Lecompt. Proteome adaptation to high temperatures in the ectothermic hydrothermal vent Pompeii worm. PloS one. vol 7. issue 2. 2012-07-31. PMID:22348046. |
in addition, the pompeii worm displays a set of amino-acid change patterns that may explain its greater thermotolerance, with a significant increase in tyr, lys and ala against val, met and gly. |
2012-07-31 |
2023-08-12 |
Not clear |