| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Julia Gaye-Siessegger, James S O McCullagh, Ulfert Focke. The effect of dietary amino acid abundance and isotopic composition on the growth rate, metabolism and tissue δ13C of rainbow trout. The British journal of nutrition. vol 105. issue 12. 2014-06-26. PMID:21418707. |
diet 1 mimicked the amino acid composition of fishmeal, in diet 2, cysteine (cys), glycine (gly), proline (pro) and tyrosine (tyr) were isonitrogenously replaced by their precursor amino acids serine (ser), glutamic acid (glu) and phenylalanine (phe), and in diet 3, alanine (ala), asparagine and aspartate, cys, gly, pro, ser and tyr were isonitrogenously replaced by glu. |
2014-06-26 |
2023-08-12 |
Not clear |
| Julia Gaye-Siessegger, James S O McCullagh, Ulfert Focke. The effect of dietary amino acid abundance and isotopic composition on the growth rate, metabolism and tissue δ13C of rainbow trout. The British journal of nutrition. vol 105. issue 12. 2014-06-26. PMID:21418707. |
dietary non-essential amino acid composition significantly influenced protein gain (p < 0·025) and δ13c of ala, arginine (arg), gly, histidine (his), phe and tyr. |
2014-06-26 |
2023-08-12 |
Not clear |
| Constance Assohou-Luty, Reinout Raijmakers, Willemien E Benckhuijsen, Judith Stammen-Vogelzangs, Arnoud de Ru, Peter A van Veelen, Kees L M C Franken, Jan W Drijfhout, Ger J M Pruij. The human peptidylarginine deiminases type 2 and type 4 have distinct substrate specificities. Biochimica et biophysica acta. vol 1844. issue 4. 2014-05-27. PMID:24594197. |
amino acid residues most commonly found in citrullination sites for both isotypes are gly at +1 and tyr at +3 relative to the target arginine. |
2014-05-27 |
2023-08-12 |
human |
| S A Adedokun, T J Applegat. Dietary electrolyte balance influences ileal endogenous amino acid losses in broiler chickens. Poultry science. vol 93. issue 4. 2014-04-24. PMID:24706971. |
arginine, ile, leu, phe, val, ala, glu, gly, pro, and tyr secretion into the gut increased (p ≤ 0.05) with an increasing level of deb. |
2014-04-24 |
2023-08-13 |
Not clear |
| Xiangyan Shi, Gregory P Holland, Jeffery L Yarge. Amino acid analysis of spider dragline silk using ¹H NMR. Analytical biochemistry. vol 440. issue 2. 2014-03-28. PMID:23727559. |
n. clavipes dragline silk was found to consist of 43.0±0.6% gly, 29.3±0.2% ala, 9.1±0.1% glx, 4.0±0.1% leu, 3.3±0.1% tyr, 3.4±0.2% ser, 2.7±0.1% pro, 2.1±0.1% arg, 1.07±0.05% asx, 0.96±0.05% val, 0.48±0.03% thr, 0.35±0.03% phe, and 0.28±0.03% ile. |
2014-03-28 |
2023-08-12 |
spider |
| Ali Rohman, Niels van Oosterwijk, Andy-Mark W H Thunnissen, Bauke W Dijkstr. Crystal structure and site-directed mutagenesis of 3-ketosteroid Δ1-dehydrogenase from Rhodococcus erythropolis SQ1 explain its catalytic mechanism. The Journal of biological chemistry. vol 288. issue 49. 2014-02-13. PMID:24165124. |
the active site contains four key residues: tyr(119), tyr(318), tyr(487), and gly(491). |
2014-02-13 |
2023-08-12 |
Not clear |
| Ali Rohman, Niels van Oosterwijk, Andy-Mark W H Thunnissen, Bauke W Dijkstr. Crystal structure and site-directed mutagenesis of 3-ketosteroid Δ1-dehydrogenase from Rhodococcus erythropolis SQ1 explain its catalytic mechanism. The Journal of biological chemistry. vol 288. issue 49. 2014-02-13. PMID:24165124. |
the c1 and c2 atoms of the substrate are at reaction distance to the n5 atom of the isoalloxazine ring of fad and the hydroxyl group of tyr(318), respectively, whereas the c3 carbonyl group is at hydrogen bonding distance from the hydroxyl group of tyr(487) and the backbone amide of gly(491). |
2014-02-13 |
2023-08-12 |
Not clear |
| Ali Rohman, Niels van Oosterwijk, Andy-Mark W H Thunnissen, Bauke W Dijkstr. Crystal structure and site-directed mutagenesis of 3-ketosteroid Δ1-dehydrogenase from Rhodococcus erythropolis SQ1 explain its catalytic mechanism. The Journal of biological chemistry. vol 288. issue 49. 2014-02-13. PMID:24165124. |
the structural features and the kinetic properties of the mutants suggest a catalytic mechanism in which tyr(487) and gly(491) work in tandem to promote keto-enol tautomerization and increase the acidity of the c2 hydrogen atoms of the substrate. |
2014-02-13 |
2023-08-12 |
Not clear |
| M L Paddock, S H Rongey, E C Abresch, G Feher, M Y Okamur. Reaction centers from three herbicide-resistant mutants of Rhodobacter sphaeroides 2.4.1: sequence analysis and preliminary characterization. Photosynthesis research. vol 17. issue 1-2. 2014-01-17. PMID:24429662. |
all mutations were located on the gene coding for the l-subunit resulting in these changes ile(229) → met, ser(223) → pro and tyr(222) → gly. |
2014-01-17 |
2023-08-12 |
Not clear |
| R Linder, H F Linsken. [Not Available]. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. vol 42. issue 3. 2014-01-17. PMID:24430833. |
the small amounts (0.1-0.5 × 10(-9) mol/mg dry weight) of the amino acids gly, α-nh2-but, ileu, leu, tyr, phe, orn, lys, his and arg show practically no changes in time and no differences among the 3 pollination conditions. |
2014-01-17 |
2023-08-12 |
Not clear |
| B A McFadden, C L Smal. Cloning, expression and directed mutagenesis of the genes for ribulose bisphosphate carboxylase/oxygenase. Photosynthesis research. vol 18. issue 1-2. 2014-01-16. PMID:24425168. |
in contrast, mutagenesis in the first conserved region leading to the following pairs of substitutions: arg10 arg 11 to gly 10 gly11; thr14 phe 15 ser 16 to ala 14 phe 15 ala 16; ser 16 tyr 17 to ala 16 asp 17; or pro 19 pro 20 to ala 19 ala 20, are all deleterious.advances are anticpated in the introduction and expression of interesting modifications of s (and l) subunit genes in plants. |
2014-01-16 |
2023-08-12 |
Not clear |
| A Anju, J Jeswin, P C Thomas, K K Vijaya. Molecular cloning, characterization and expression analysis of F-type lectin from pearl oyster Pinctada fucata. Fish & shellfish immunology. vol 35. issue 1. 2014-01-06. PMID:23624143. |
a signal peptide at the n-terminus of the deduced polypeptide was predicted by the signal p program and the cleavage site is located between the positions of gly(19)and tyr(20). |
2014-01-06 |
2023-08-12 |
Not clear |
| Akos Boldizsár, Livia Simon-Sarkadi, Krisztina Szirtes, Alexandra Soltész, Gabriella Szalai, Marshall Keyster, Ndiko Ludidi, Gábor Galiba, Gábor Kocs. Nitric oxide affects salt-induced changes in free amino acid levels in maize. Journal of plant physiology. vol 170. issue 11. 2013-12-30. PMID:23548311. |
l-nna treatment resulted in a significant increase in the ala, val, gly and tyr contents. |
2013-12-30 |
2023-08-12 |
Not clear |
| Ramalingam Radhakrishnan, Suk-Bok Pae, Kang-Bo Shim, In-Youl Bae. Penicillium sp. mitigates Fusarium-induced biotic stress in sesame plants. Biotechnology letters. vol 35. issue 7. 2013-12-13. PMID:23479415. |
fusarium-infected sesame plants have significantly higher contents of amino acids (asp, thr, ser, asn, glu, gly, ala, val, met, ile, leu, tyr, phe, lys, his, try, arg, and pro), compared with their respective levels in the healthy control. |
2013-12-13 |
2023-08-12 |
Not clear |
| R B Hallick, M J Hollingsworth, J A Nickolof. Transfer RNA genes of Euglena gracilis chloroplast DNA : A review. Plant molecular biology. vol 3. issue 3. 2013-12-09. PMID:24310350. |
genes corresponding to the amino acids ala, arg, asn, cys, gln, gly (2), glu, his, ile, leu (2), met (2), phe, ser, thr, trp, tyr, val, and one unassigned species have been identified. |
2013-12-09 |
2023-08-12 |
Not clear |
| Mauricio Aurelio Gomes Heleno, Paulo Aparecido Baldasso, Luis Alberto Ponce-Soto, Sérgio Marangon. Biochemical characterization and pharmacological properties of new basic PLA2 BrTX-I isolated from Bothrops roedingeri (Roedinger's Lancehead) Mertens, 1942, snake venom. BioMed research international. vol 2013. 2013-11-12. PMID:23509747. |
the amino acid composition showed that brtx-i has a high content of lys, tyr, gly, pro, and 14 half-cys residues, typical of a basic pla2. |
2013-11-12 |
2023-08-12 |
mouse |
| C Kong, O Adeol. Additivity of amino acid digestibility in corn and soybean meal for broiler chickens and White Pekin ducks. Poultry science. vol 92. issue 9. 2013-11-12. PMID:23960121. |
for ducks, the differences between the measured and predicted aid were significant (p < 0.05) for cp and all aa except for 8 aa (arg, ile, thr, val, asp, gly, pro, and tyr). |
2013-11-12 |
2023-08-12 |
Not clear |
| S Miskosky, S G Bertolotti, N A García, G A Argüell. On the O2( (1)Δ g )-mediated photooxidative behaviour of tripeptide glycyl-tyrosyl-alanine in alkaline medium A kinetic study. Amino acids. vol 4. issue 1-2. 2013-11-06. PMID:24190561. |
it has two non-oxidizable amino-acids (gly and ala) bonded to the oxidizable one, tyr. |
2013-11-06 |
2023-08-12 |
Not clear |
| Jia Nee Foo, Karin E Smedby, Nicholas K Akers, Mattias Berglund, Ishak D Irwan, Xiaoming Jia, Yi Li, Lucia Conde, Hatef Darabi, Paige M Bracci, Mads Melbye, Hans-Olov Adami, Bengt Glimelius, Chiea Chuen Khor, Henrik Hjalgrim, Leonid Padyukov, Keith Humphreys, Gunilla Enblad, Christine F Skibola, Paul I W de Bakker, Jianjun Li. Coding variants at hexa-allelic amino acid 13 of HLA-DRB1 explain independent SNP associations with follicular lymphoma risk. American journal of human genetics. vol 93. issue 1. 2013-09-16. PMID:23791106. |
out of six possible amino acids that occurred at that position within the population, we classified two as high risk (tyr and phe), two as low risk (ser and arg), and two as moderate risk (his and gly). |
2013-09-16 |
2023-08-12 |
human |
| Rajendra K Singh, Talat Jabeen, Sujata Sharma, Punit Kaur, A Srinivasan, Tej P Sing. Crystal structure of a novel phospholipase A2 from crude venom of Indian cobra sub-species Naja naja sagittifera at 1.48 angstoms resolution. Indian journal of biochemistry & biophysics. vol 42. issue 5. 2013-08-26. PMID:23923535. |
the presence of lys at position 31 has a stabilizing effect on the loop tyr 25-cys 29 by interacting with carbonyl oxygen atoms of tyr 25, gly 26 and cys 29. |
2013-08-26 |
2023-08-12 |
Not clear |