| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Azzurra Stefanucci, Wei Lei, Stefano Pieretti, Marilisa Pia Dimmito, Grazia Luisi, Ettore Novellino, Michał Nowakowski, Wiktor Koźmiński, Sako Mirzaie, Gokhan Zengin, John M Streicher, Adriano Mollic. Novel Cyclic Biphalin Analogues by Ruthenium-Catalyzed Ring Closing Metathesis: ACS medicinal chemistry letters. vol 10. issue 4. 2020-09-28. PMID:30996778. |
novel cyclic biphalin analogues by ruthenium-catalyzed ring closing metathesis: in this work we report the application of the ring-closing metathesis (rcm) to the preparation of two cyclic olefin-bridged analogues of biphalin (tyr-d-ala-gly-phe-nh-nh ← phe ← gly ← d-ala ← tyr), using the second generation grubbs' catalyst. |
2020-09-28 |
2023-08-13 |
Not clear |
| Jiří Průša, Michal Cifr. Dataset of molecular dynamics simulation trajectories of amino-acid solutions with various force fields, water models and modified force field parameters. Data in brief. vol 30. 2020-09-28. PMID:32368577. |
we present molecular dynamics (md) trajectories of water solutions of eight zwitterionic amino-acids (l- form) glycine (gly), alanine (ala), proline (pro), threonine (thr), leucine (leu), glutamine (gln), histidine (his) and tyrosine (tyr) using various force field (opls-aa, amber99ff-sb, gromos96 54a7, charmm19) and water model (spc/e, tip3p) combinations. |
2020-09-28 |
2023-08-13 |
Not clear |
| Yaffa Shalit, Inbal Tuvi-Ara. Side chain flexibility and the symmetry of protein homodimers. PloS one. vol 15. issue 7. 2020-09-15. PMID:32706779. |
these include: ile, pro, his, val, cys, leu, trp, tyr, phe, ala and gly. |
2020-09-15 |
2023-08-13 |
Not clear |
| Deepak M Kalaskar, Julie E Gough, Rein V Ulijn, William W Sampson, David J Scurr, Frank J Rutten, Morgan R Alexander, Catherine L R Merry, Stephen J Eichhor. Controlling cell morphology on amino acid-modified cellulose. Soft matter. vol 4. issue 5. 2020-09-10. PMID:32907139. |
hydrophilic (gly, ser), aliphatic (ala, val, leu, ile) and aromatic amino acids (phe, tyr, trp), coupled to the cellulose via esterification, give rise to different cell morphologies. |
2020-09-10 |
2023-08-13 |
Not clear |
| Shingo Kondo, Yu Kato, Satoshi Minagawa, Yoshikazu Sugimot. STAT1 upregulates glutaminase and modulates amino acids and glutathione metabolism. Biochemical and biophysical research communications. vol 523. issue 3. 2020-09-08. PMID:31948748. |
the abcb5/stat1 high-expressing clones showed higher cellular levels of ala, glu, and asp and lower cellular levels of phe, trp, leu, ile, gly, met, tyr, val, and his compared to the abcb5/stat1 low-expressing clones. |
2020-09-08 |
2023-08-13 |
human |
| Brian J Kerr, Shelby M Curry, Brett C Ramire. Lack of interactive effects between diet composition and acid addition with drying method on amino acid digestibility values in porcine ileal digesta. Journal of animal science. vol 98. issue 2. 2020-06-16. PMID:31993632. |
in experiment 1, there was no diet type by drying-method interactions noted for any of the aa (p > 0.10).od resulted in a higher aid of aa compared with samples which were fd (p ≤ 0.10), for all aa except for gly and tyr. |
2020-06-16 |
2023-08-13 |
Not clear |
| Leonor Lopes de Carvalho, Eva Bligt-Lindén, Arunachalam Ramaiah, Mark S Johnson, Tiina A Salmine. Evolution and functional classification of mammalian copper amine oxidases. Molecular phylogenetics and evolution. vol 139. 2020-03-10. PMID:31351182. |
the phylogenetic results show that caos can be classified based on two residues, x1 and x2, from the active site motif: t/s-x1-x2-n-y-d. residue x2 discriminates among the aoc1 (tyr), aoc2 (gly), and aoc3/aoc4 (leu) proteins, while residue x1 further classifies the aoc3 (leu) and aoc4 (met) proteins that so far have been poorly identified and annotated. |
2020-03-10 |
2023-08-13 |
Not clear |
| Ya-Lin Zhang, Xu-Dong Duan, Wei-Dan Jiang, Lin Feng, Pei Wu, Yang Liu, Jun Jiang, Sheng-Yao Kuang, Ling Tang, Wu-Neng Tang, Xiao-Qiu Zho. Soybean glycinin decreased growth performance, impaired intestinal health, and amino acid absorption capacity of juvenile grass carp (Ctenopharyngodon idella). Fish physiology and biochemistry. vol 45. issue 5. 2020-02-18. PMID:31256306. |
results were displayed as follows: (1) 8% dietary glycinin decreased growth performance, inhibited intestinal growth, and caused intestinal histology damage of grass carp; (2) dietary glycinin decreased the content of free neutral aas including val, ser, tyr, ala, pro, and gln in all intestinal segments, and thr, ile, leu, phe, and gly in the mi and di while downregulated the mrna levels of corresponding transporters including slc38a2, slc6a19b, and slc6a14 in all intestinal segments, and slc7a5, slc7a8, and slc1a5 in the mi and di. |
2020-02-18 |
2023-08-13 |
Not clear |
| T Miyashita, R Takagi, M Okushima, S Nakano, H Miyamoto, E Nishikawa, A Matsushir. Complementary DNA Cloning and Characterization of Pearlin, a New Class of Matrix Protein in the Nacreous Layer of Oyster Pearls. Marine biotechnology (New York, N.Y.). vol 2. issue 5. 2019-11-20. PMID:11246407. |
sequence analysis reveals that pearlin is composed of 129 amino acids with a high proportion of gly (10.8%), tyr (10.0%), cys (8.5%), asn (7.7%), asp (7.7%), and arg (7.7%). |
2019-11-20 |
2023-08-12 |
Not clear |
| Heinz-Bernhard Kraatz, Janusz Lusztyk, Gary D. Enrigh. Ferrocenoyl Amino Acids: A Synthetic and Structural Study. Inorganic chemistry. vol 36. issue 11. 2019-11-20. PMID:11669877. |
a series of ester-protected amino acids were coupled to ferrocenecarboxylic acid (1) using the dcc/hobt protocol to give ferrocenoyl n-amino acids (amino acid = glu(obz)(2) (2a), gly(oet) (2b), pro(obz) (2c), cys(sbz)ome (2d), ala(obz) (2e), tyr(obz) (2f), phe(obz) (2g)). |
2019-11-20 |
2023-08-12 |
Not clear |
| Ling-Yun Li, Yi-Peng Q. The Point Mutations in Hemagglutinin Gene of Measles Virus Are Responsible for Alteration in Hemadsorption. Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica. vol 30. issue 5. 2019-11-20. PMID:12168019. |
our data show that two mutations, asn to tyr at position 481 and ser to gly at position 546 in hemagglutinin glycoprotein are responsible for alteration in hemadsorption. |
2019-11-20 |
2023-08-12 |
monkey |
| Yu F Roslyakov, I M Pochitskaya, V V Litvyak, A N Kuryanovic. [Modeling of the Voprosy pitaniia. vol 86. issue 3. 2019-11-20. PMID:30645868. |
variations in the concentration of amino acids in the reaction medium with increasing temperature were characteristic for asp, gly, tyr, phe, ile, and with increasing the reaction time for asp, glu, his, gly, arg, ala, tyr, cys, phe, lys. |
2019-11-20 |
2023-08-13 |
chicken |
| Anahita Bahmanjeh, Mojtaba Noofeli, Pejvak Khaki, Seyed Mehdi Hassanzade. Genetic analysis of clinical and vaccine strains of Bordetella pertussis by Pulsed-Field Gel Electrophoresis (PFGE), Multi Locus Sequence Typing (MLST) and serotyping. Comparative immunology, microbiology and infectious diseases. vol 64. 2019-11-08. PMID:31174694. |
in mlst study, seven housekeeping genes including adk, pgm, fum c, tyr b, gly a, pep a and icd were analyzed which showed no changes in the sequence of clinical and vaccine strains with 100% homology. |
2019-11-08 |
2023-08-13 |
Not clear |
| Marta Díaz-Caballero, Susanna Navarro, Isabel Fuentes, Francesc Teixidor, Salvador Ventur. Minimalist Prion-Inspired Polar Self-Assembling Peptides. ACS nano. vol 12. issue 6. 2019-09-30. PMID:29812908. |
the ability to transit between these two conformations is encoded in the so-called prion domains (prds), which are long and disordered regions of low complexity, enriched in polar and uncharged amino acids such as gln, asn, tyr, ser, and gly. |
2019-09-30 |
2023-08-13 |
human |
| Shi Shen, Jingbo Wang, Xi Chen, Tingting Liu, Qin Zhuo, Shuang-Qing Zhan. Evaluation of cellular antioxidant components of honeys using UPLC-MS/MS and HPLC-FLD based on the quantitative composition-activity relationship. Food chemistry. vol 293. 2019-07-30. PMID:31151598. |
based on the quantitative composition-activity relationship, the cellular antioxidant activity (caa) assay of various honeys is closely related with the interaction of some phenolic compounds (isoferulic acid, 3,4-dihydroxy benzoic acid, 4-hydroxy benzoic acid, chlorogenic acid, caffeic acid, gallic acid, cryptochlorogenic acid, p-coumaric acid, salicylic acid), flavonoids (isosakuranetin, sakuranetin, pinocembrin, vitexin, taxifolin, galangin, luteolin, chrysin) and free amino acids (tyr, gly, ile, glu, val, phe, leu, asp, his, pro, ala). |
2019-07-30 |
2023-08-13 |
Not clear |
| Matthew S Crouse, Nathaniel P Greseth, Kyle J McLean, Mellissa R Crosswhite, Nicolas Negrin Pereira, Alison K Ward, Lawrence P Reynolds, Carl R Dahlen, Bryan W Neville, Pawel P Borowicz, Joel S Cato. Maternal nutrition and stage of early pregnancy in beef heifers: impacts on hexose and AA concentrations in maternal and fetal fluids1. Journal of animal science. vol 97. issue 3. 2019-05-01. PMID:30649334. |
samples were then analyzed for concentrations of aas and intermediary metabolites: alanine (ala), arginine, asparagine (asn), aspartate (asp), citrulline, cysteine, glutamine, glutamate (glu), glycine (gly), histidine, isoleucine, leucine (leu), lysine, methionine (met), ornithine, phenylalanine (phe), proline (pro), serine (ser), threonine (thr), tryptophan, tyrosine (tyr), and valine (val). |
2019-05-01 |
2023-08-13 |
cattle |
| Peng Wang, Tingting Liu, Xinxin Zhou, Guoping Zh. Evaluation of the Potential Phosphorylation Effect on Isocitrate Dehydrogenases from Saccharomyces cerevisiae and Yarrowia lipolytica. Applied biochemistry and biotechnology. vol 187. issue 4. 2019-04-25. PMID:30903384. |
meanwhile, the effects of another four amino acids (thr, tyr, gly, ala) with various side chain on idh activity were determined as well. |
2019-04-25 |
2023-08-13 |
Not clear |
| Susan F Steinber. Post-translational modifications at the ATP-positioning G-loop that regulate protein kinase activity. Pharmacological research. vol 135. 2019-04-10. PMID:30048755. |
of note, in many protein kinases, the second and third glycine residues in the g-loop triad flank residues that can be targets for phosphorylation (ser, thr, or tyr) or other post-translational modifications (ubiquitination, acetylation, o-glcnacylation, oxidation). |
2019-04-10 |
2023-08-13 |
Not clear |
| Bijun Tang, Steven O Devenish, Sarah C R Lummi. Identification of Novel Functionally Important Aromatic Residue Interactions in the Extracellular Domain of the Glycine Receptor. Biochemistry. vol 57. issue 27. 2019-03-26. PMID:29947514. |
here we explore the roles of tyr and trp residues in the ecd of the glycine receptor and show that four such residues that have not been previously studied (y24, y58, w170, and y197) contribute significantly to the function of the protein. |
2019-03-26 |
2023-08-13 |
xenopus_laevis |
| Kai Lu, Bowen Wu, Jie Wang, Wei Zhu, Haipeng Nie, Junjie Qian, Weiting Huang, Zhongming Fan. Blocking amino acid transporter OsAAP3 improves grain yield by promoting outgrowth buds and increasing tiller number in rice. Plant biotechnology journal. vol 16. issue 10. 2019-03-18. PMID:29479779. |
elevated expression of osaap3 in transgenic plants resulted in significantly higher amino acid concentrations of lys, arg, his, asp, ala, gln, gly, thr and tyr, and inhibited bud outgrowth and rice tillering. |
2019-03-18 |
2023-08-13 |
Not clear |