| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Stephan Baldus, Jason P Eiserich, Marie-Luise Brennan, Robert M Jackson, C Bruce Alexander, Bruce A Freema. Spatial mapping of pulmonary and vascular nitrotyrosine reveals the pivotal role of myeloperoxidase as a catalyst for tyrosine nitration in inflammatory diseases. Free radical biology & medicine. vol 33. issue 7. 2003-04-02. PMID:12361810. |
these observations reveal that (i) sequestration of neutrophil-derived mpo in vascular endothelial and alveolar epithelial compartments is an important aspect of mpo distribution and action in vivo, (ii) mpo-catalyzed no(2)tyr formation occurs in diverse vascular and pulmonary inflammatory pathologies, and (iii) extracellular matrix fn is an important target of tyrosine nitration in these inflammatory processes. |
2003-04-02 |
2023-08-12 |
mouse |
| Stephan Baldus, Jason P Eiserich, Marie-Luise Brennan, Robert M Jackson, C Bruce Alexander, Bruce A Freema. Spatial mapping of pulmonary and vascular nitrotyrosine reveals the pivotal role of myeloperoxidase as a catalyst for tyrosine nitration in inflammatory diseases. Free radical biology & medicine. vol 33. issue 7. 2003-04-02. PMID:12361810. |
the extracellular matrix protein fibronectin (fn), previously identified as a primary site of mpo association in vascular inflammatory reactions, proved to be a major target protein for tyrosine nitration, with a strong colocalization of mpo, no(2)tyr, and tissue fn occurring. |
2003-04-02 |
2023-08-12 |
mouse |
| P Chiarugi, M L Taddei, P Cirri, D Talini, F Buricchi, G Camici, G Manao, G Raugei, G Rampon. Low molecular weight protein-tyrosine phosphatase controls the rate and the strength of NIH-3T3 cells adhesion through its phosphorylation on tyrosine 131 or 132. The Journal of biological chemistry. vol 275. issue 48. 2001-01-11. PMID:10980198. |
in conclusion, lmw-ptp tyrosine phosphorylation on both tyr(131) or tyr(132) cooperate to determine a faster and stronger adhesion to extracellular matrix, although these two events may diverge in timing and relative amount. |
2001-01-11 |
2023-08-12 |
Not clear |
| B A Pelayo, Y M Fu, G G Meadow. Inhibition of B16BL6 melanoma invasion by tyrosine and phenylalanine deprivation is associated with decreased secretion of plasminogen activators and increased plasminogen activator inhibitors. Clinical & experimental metastasis. vol 17. issue 10. 2000-12-11. PMID:11089882. |
tyr and phe deprivation in vitro decreased the attachment of b16bl6 melanoma cells to gfr matrigel, heparin sulfate proteoglycans (hspg), neonatal murine epidermal (nme) cells and the extracellular matrix (ecm) from these cells. |
2000-12-11 |
2023-08-12 |
cattle |
| S N Bhattacharyya, S Mukherjee, S Adhy. Mutations in a tRNA import signal define distinct receptors at the two membranes of Leishmania mitochondria. Molecular and cellular biology. vol 20. issue 19. 2000-10-19. PMID:10982857. |
an oligoribonucleotide constituting the d stem-loop import signal of trna(tyr)(gua) was efficiently transported into the mitochondrial matrix in organello as well as in vivo. |
2000-10-19 |
2023-08-12 |
Not clear |
| S Mukherjee, S N Bhattacharyya, S Adhy. Stepwise transfer of tRNA through the double membrane of Leishmania mitochondria. The Journal of biological chemistry. vol 274. issue 44. 1999-12-16. PMID:10531321. |
significant amounts of trna(tyr) were localized in the matrix and on the outer face of the inner mitochondrial membrane. |
1999-12-16 |
2023-08-12 |
Not clear |
| M Brunori, F Cutruzzolà, C Savino, C Travaglini-Allocatelli, B Vallone, Q H Gibso. Structural dynamics of ligand diffusion in the protein matrix: A study on a new myoglobin mutant Y(B10) Q(E7) R(E10). Biophysical journal. vol 76. issue 3. 1999-04-05. PMID:10049310. |
these results and md simulations suggest that the ligand migrates in the protein matrix to a major "secondary site," located beneath tyr(b10)29 and accessible via the motion of ile(g8)107; this site is different from the "primary site" identified by others who investigated the photolyzed state of wild-type mb by crystallography. |
1999-04-05 |
2023-08-12 |
Not clear |
| F N Fu, R B Lomneth, S Cai, B R Sing. Role of zinc in the structure and toxic activity of botulinum neurotoxin. Biochemistry. vol 37. issue 15. 1998-05-14. PMID:9548758. |
however, near-uv circular dichroism signals suggested significant alterations in the topography of phe and tyr residues that could be buried in the protein matrix. |
1998-05-14 |
2023-08-12 |
Not clear |
| M DiBrino, K C Parker, J Shiloach, M Knierman, J Lukszo, R V Turner, W E Biddison, J E Coliga. Endogenous peptides bound to HLA-A3 possess a specific combination of anchor residues that permit identification of potential antigenic peptides. Proceedings of the National Academy of Sciences of the United States of America. vol 90. issue 4. 1993-03-16. PMID:7679507. |
the importance of leu at p2 and tyr or lys at p9 ("anchor" residues) for peptide binding to hla-a3 was demonstrated by the following results: (i) peptides glfgggggy, glfgggggk, and glggggfgy, but not glfgggggv, specifically bound to hla-a3 and (ii) six nonapeptides from within the influenza a nucleoprotein, matrix, and polymerase proteins, selected for synthesis based upon their possession of p2 and p9 anchor residues, were shown to bind hla-a3. |
1993-03-16 |
2023-08-12 |
human |
| S Karlin, P Buche. Correlation analysis of amino acid usage in protein classes. Proceedings of the National Academy of Sciences of the United States of America. vol 89. issue 24. 1993-01-19. PMID:1465457. |
our correlation analysis reveals three major tendencies: (i) charge compensation reflected by the high correlation of basic with acidic residues; (ii) the positive correlations of functionally and structurally similar amino acids including many pairs of hydrophobic amino acids, all pairs of aromatic amino acids, the anionic pair (glutamate and aspartate), but not the cationic pair (lysine and arginine), moderately the hydroxyl pair (serine and threonine), the small amino acids (glycine and alanine), and many (but not all) of those having high values in the dayhoff substitutability matrix (characteristics such as amino acid polarity or codon usage agreement, except for the wobble position, do not necessarily imply significant positive correlations); (iii) a widespread negative correlation of the aggregate strong codon group amino acids (ala, gly, pro) versus the weak codon group amino acids (lys, ile, tyr, asn, phe). |
1993-01-19 |
2023-08-11 |
human |
| W Gallagher, F Tao, C Woodwar. Comparison of hydrogen exchange rates for bovine pancreatic trypsin inhibitor in crystals and in solution. Biochemistry. vol 31. issue 19. 1992-06-18. PMID:1374641. |
within the slower group, however, a very large effect on exchange of ile 18 and tyr 35 appears to be selectively transmitted through the matrix of the molecule. |
1992-06-18 |
2023-08-11 |
cattle |
| N Shimojo, R W Anderson, D H Mattson, R V Turner, J E Coligan, W E Biddiso. The kinetics of peptide binding to HLA-A2 and the conformation of the peptide-A2 complex can be determined by amino acid side chains on the floor of the peptide binding groove. International immunology. vol 2. issue 3. 1991-05-29. PMID:2088485. |
hla-a2 molecules with naturally occurring single amino acid substitutions of phe to tyr at position 9 (hla-a2.4a, tyr9) and tyr to cys at position 99 (hla-a2.4b, cys99) and a site directed mutant with a val to leu substitution at position 95 (leu95) were examined for their ability to present the influenza virus matrix m1 55-73 peptide and several sequence variants of the m1 peptide to a panel of 36 m1 55-73-specific hla-a2.1-restricted ctl lines. |
1991-05-29 |
2023-08-11 |
Not clear |
| H Teraoka, Y Ohmura, K Tsukad. The nuclear matrix from rat liver is capable of phosphorylating exogenous tyrosine-containing substrates. Biochemistry international. vol 18. issue 6. 1989-08-17. PMID:2751683. |
the nuclear matrix isolated from rat liver phosphorylated exogenous tyrosine-containing substrates angiotensin ii and synthetic polymer (glu, tyr; 4:1). |
1989-08-17 |
2023-08-11 |
rat |
| B A Roe, A F Stankiewicz, C Y Che. Chromatographic behavior of several mammalian tRNAs on acylated dihydroxyl-borate cellulose and Aminex A-28. Nucleic acids research. vol 4. issue 7. 1977-11-30. PMID:333387. |
studies of the chromatographic behavior of mammalian trnas, from several sources, on acylated dbae-cellulose indicate that species of trna asn , trna asp and trna his can be retained on this matrix, while species of trna tyr, trna asn and trna asp are not retained. |
1977-11-30 |
2023-08-11 |
rat |